DGE between responders in IP
Results
All cells
single cell
sample level
## Warning: Removed 8034 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 105 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
major cell type level
## Warning: Removed 8033 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 106 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 9093 rows containing missing values (`geom_text_repel()`).
cell subtype level
## Warning: Removed 7362 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 27 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8529 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 70 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 7199 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 145 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 9358 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 301 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 6913 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 251 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8626 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 247 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 3185 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 120 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8651 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 168 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8299 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 13 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 6577 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 46 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 9093 rows containing missing values (`geom_text_repel()`).Pseudobulk
sample level
## Warning: Removed 13100 rows containing missing values (`geom_text_repel()`).
major cell type level
## Warning: Removed 13100 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 2 rows containing missing values (`geom_point()`).## Warning: Removed 11576 rows containing missing values (`geom_text_repel()`).
cell subtype level
## Warning: Removed 13047 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13070 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 1 rows containing missing values (`geom_point()`).## Warning: Removed 13100 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13079 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 1 rows containing missing values (`geom_point()`).## Warning: Removed 13095 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13066 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13100 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13087 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 13084 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12906 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 2 rows containing missing values (`geom_point()`).## Warning: Removed 11576 rows containing missing values (`geom_text_repel()`).CAR+ cells
single cell
sample level
## Warning: Removed 8586 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 64 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
major cell type level
## Warning: Removed 8583 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 65 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
cell subtype level
## Warning: Removed 7986 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 8739 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 94 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 7810 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 65 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 9797 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 138 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 7279 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 92 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8977 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 87 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 3573 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 22 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 9065 rows containing missing values (`geom_text_repel()`).## Warning: ggrepel: 9 unlabeled data points (too many overlaps). Consider
## increasing max.overlaps
## Warning: Removed 8815 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 7300 rows containing missing values (`geom_text_repel()`).
Pseudobulk
sample level
## Warning: Removed 12365 rows containing missing values (`geom_text_repel()`).
major cell type level
## Warning: Removed 12365 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 1 rows containing missing values (`geom_point()`).## Warning: Removed 9945 rows containing missing values (`geom_text_repel()`).
cell subtype level
## Warning: Removed 12278 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12332 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 1 rows containing missing values (`geom_point()`).## Warning: Removed 12363 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12329 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 2 rows containing missing values (`geom_point()`).## Warning: Removed 12358 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12302 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12365 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12348 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12358 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 12141 rows containing missing values (`geom_text_repel()`).
## Warning: Removed 1 rows containing missing values (`geom_point()`).## Warning: Removed 9945 rows containing missing values (`geom_text_repel()`).